Trend Research Centre


5000 CLUB OF THE BIOTECHNOLOGY AND APPLIED MICROBIOLOGY

Science Citation Index-Expanded (SCI-EXPANDED) --1900-present

There were 50,965,288 publications including 35,270,278 articles in the SCI-EXPANDED from 1900

There were 675,476 publications including 529,200 articles in Web of Science category of the biotechnology and applied microbiology

25 articles have been cited at least 5000 times from Web of Science Core Collection.

Data last updated 06 July 2018

Figure 1. 5000 club of the biotechnology and applied microbiology by year

 

Figure 2. 5000 club of the biotechnology and applied microbiology by total citations

 

Figure 3. 5000 club of the biotechnology and applied microbiology by citations per year

 

Figure 4. 5000 club of the biotechnology and applied microbiology by total citations in 2017

 

Record 1 of 25

Title: MrBayes 3: Bayesian phylogenetic inference under mixed models

Author(s): Ronquist, F (Ronquist, F); Huelsenbeck, JP (Huelsenbeck, JP)

Source: BIOINFORMATICS Volume: 19 Issue: 12 Pages: 1572-1574 DOI: 10.1093/bioinformatics/btg180 Published: AUG 12 2003

Times Cited in Web of Science Core Collection: 18361

Total Times Cited: 19014

 

 

Record 2 of 25

Title: MODELTEST: testing the model of DNA substitution

Author(s): Posada, D (Posada, D); Crandall, KA (Crandall, KA)

Source: BIOINFORMATICS Volume: 14 Issue: 9 Pages: 817-818 DOI: 10.1093/bioinformatics/14.9.817 Published: 1998

Times Cited in Web of Science Core Collection: 16214

Total Times Cited: 16922

 

 

Record 3 of 25

Title: Clustal W and clustal X version 2.0

Author(s): Larkin, MA (Larkin, M. A.); Blackshields, G (Blackshields, G.); Brown, NP (Brown, N. P.); Chenna, R (Chenna, R.); McGettigan, PA (McGettigan, P. A.); McWilliam, H (McWilliam, H.); Valentin, F (Valentin, F.); Wallace, IM (Wallace, I. M.); Wilm, A (Wilm, A.); Lopez, R (Lopez, R.); Thompson, JD (Thompson, J. D.); Gibson, TJ (Gibson, T. J.); Higgins, DG (Higgins, D. G.)

Source: BIOINFORMATICS Volume: 23 Issue: 21 Pages: 2947-2948 DOI: 10.1093/bioinformatics/btm404 Published: NOV 1 2007

Times Cited in Web of Science Core Collection: 15364

Total Times Cited: 15922

 

 

Record 4 of 25

Title: MRBAYES: Bayesian inference of phylogenetic trees

Author(s): Huelsenbeck, JP (Huelsenbeck, JP); Ronquist, F (Ronquist, F)

Source: BIOINFORMATICS Volume: 17 Issue: 8 Pages: 754-755 DOI: 10.1093/bioinformatics/17.8.754 Published: AUG 2001

Times Cited in Web of Science Core Collection: 14833

Total Times Cited: 15355

 

 

Record 5 of 25

Title: The Sequence Alignment/Map format and SAMtools

Author(s): Li, H (Li, Heng); Handsaker, B (Handsaker, Bob); Wysoker, A (Wysoker, Alec); Fennell, T (Fennell, Tim); Ruan, J (Ruan, Jue); Homer, N (Homer, Nils); Marth, G (Marth, Gabor); Abecasis, G (Abecasis, Goncalo); Durbin, R (Durbin, Richard)

Group Author(s): 1000 Genome Project Data Proc

Source: BIOINFORMATICS Volume: 25 Issue: 16 Pages: 2078-2079 DOI: 10.1093/bioinformatics/btp352 Published: AUG 15 2009

Times Cited in Web of Science Core Collection: 11148

Total Times Cited: 11261

 

 

Record 6 of 25

Title: Fast and accurate short read alignment with Burrows-Wheeler transform

Author(s): Li, H (Li, Heng); Durbin, R (Durbin, Richard)

Source: BIOINFORMATICS Volume: 25 Issue: 14 Pages: 1754-1760 DOI: 10.1093/bioinformatics/btp324 Published: JUL 15 2009

Times Cited in Web of Science Core Collection: 10356

Total Times Cited: 10485

 

 

Record 7 of 25

Title: Haploview: analysis and visualization of LD and haplotype maps

Author(s): Barrett, JC (Barrett, JC); Fry, B (Fry, B); Maller, J (Maller, J); Daly, MJ (Daly, MJ)

Source: BIOINFORMATICS Volume: 21 Issue: 2 Pages: 263-265 DOI: 10.1093/bioinformatics/bth457 Published: JAN 15 2005

Times Cited in Web of Science Core Collection: 9660

Total Times Cited: 9814

 

 

Record 8 of 25

Title: RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Author(s): Stamatakis, A (Stamatakis, Alexandros)

Source: BIOINFORMATICS Volume: 22 Issue: 21 Pages: 2688-2690 DOI: 10.1093/bioinformatics/btl446 Published: NOV 1 2006

Times Cited in Web of Science Core Collection: 9120

Total Times Cited: 9291

 

 

Record 9 of 25

Title: Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Author(s): Langmead, B (Langmead, Ben); Trapnell, C (Trapnell, Cole); Pop, M (Pop, Mihai); Salzberg, SL (Salzberg, Steven L.)

Source: GENOME BIOLOGY Volume: 10 Issue: 3 Article Number: R25 DOI: 10.1186/gb-2009-10-3-r25 Published: 2009

Times Cited in Web of Science Core Collection: 8402

Total Times Cited: 8529

 

 

Record 10 of 25

Title: Searching for SNPs with cloud computing

Author(s): Langmead, B (Langmead, Ben); Schatz, MC (Schatz, Michael C.); Lin, J (Lin, Jimmy); Pop, M (Pop, Mihai); Salzberg, SL (Salzberg, Steven L.)

Source: GENOME BIOLOGY Volume: 10 Issue: 11 Article Number: R134 DOI: 10.1186/gb-2009-10-11-r134 Published: 2009

Times Cited in Web of Science Core Collection: 8402

Total Times Cited: 8529

 

 

Record 11 of 25

Title: Cytoscape: A software environment for integrated models of biomolecular interaction networks

Author(s): Shannon, P (Shannon, P); Markiel, A (Markiel, A); Ozier, O (Ozier, O); Baliga, NS (Baliga, NS); Wang, JT (Wang, JT); Ramage, D (Ramage, D); Amin, N (Amin, N); Schwikowski, B (Schwikowski, B); Ideker, T (Ideker, T)

Source: GENOME RESEARCH Volume: 13 Issue: 11 Pages: 2498-2504 DOI: 10.1101/gr.1239303 Published: NOV 2003

Times Cited in Web of Science Core Collection: 7741

Total Times Cited: 7932

Conference Title: 3rd International Conference on Systems Biology 2002

Conference Date: DEC 13-15, 2002

Conference Location: KAROLINSKA INST, STOCKHOLM, SWEDEN

Conference Host: KAROLINSKA INST

 

 

Record 12 of 25

Title: PROFILING OF COMPLEX MICROBIAL-POPULATIONS BY DENATURING GRADIENT GEL-ELECTROPHORESIS ANALYSIS OF POLYMERASE CHAIN REACTION-AMPLIFIED GENES-CODING FOR 16S RIBOSOMAL-RNA

Author(s): MUYZER, G (MUYZER, G); DEWAAL, EC (DEWAAL, EC); UITTERLINDEN, AG (UITTERLINDEN, AG)

Source: APPLIED AND ENVIRONMENTAL MICROBIOLOGY Volume: 59 Issue: 3 Pages: 695-700 Published: MAR 1993

Times Cited in Web of Science Core Collection: 7643

Total Times Cited: 8725

 

 

Record 13 of 25

Title: Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

Author(s): Vandesompele, J (Vandesompele, Jo); De Preter, K (De Preter, Katleen); Pattyn, F (Pattyn, Filip); Poppe, B (Poppe, Bruce); Van Roy, N (Van Roy, Nadine); De Paepe, A (De Paepe, Anne); Speleman, F (Speleman, Frank)

Source: GENOME BIOLOGY Volume: 3 Issue: 7 Article Number: 0034.1 DOI: 10.1186/gb-2002-3-7-research0034 Published: 2002

Times Cited in Web of Science Core Collection: 7566

Total Times Cited: 7738

 

 

Record 14 of 25

Title: DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

Author(s): Librado, P (Librado, P.); Rozas, J (Rozas, J.)

Source: BIOINFORMATICS Volume: 25 Issue: 11 Pages: 1451-1452 DOI: 10.1093/bioinformatics/btp187 Published: JUN 1 2009

Times Cited in Web of Science Core Collection: 7431

Total Times Cited: 7885

 

 

Record 15 of 25

Title: Bioconductor: open software development for computational biology and bioinformatics

Author(s): Gentleman, RC (Gentleman, RC); Carey, VJ (Carey, VJ); Bates, DM (Bates, DM); Bolstad, B (Bolstad, B); Dettling, M (Dettling, M); Dudoit, S (Dudoit, S); Ellis, B (Ellis, B); Gautier, L (Gautier, L); Ge, YC (Ge, YC); Gentry, J (Gentry, J); Hornik, K (Hornik, K); Hothorn, T (Hothorn, T); Huber, W (Huber, W); Iacus, S (Iacus, S); Irizarry, R (Irizarry, R); Leisch, F (Leisch, F); Li, C (Li, C); Maechler, M (Maechler, M); Rossini, AJ (Rossini, AJ); Sawitzki, G (Sawitzki, G); Smith, C (Smith, C); Smyth, G (Smyth, G); Tierney, L (Tierney, L); Yang, JYH (Yang, JYH); Zhang, JH (Zhang, JH)

Source: GENOME BIOLOGY Volume: 5 Issue: 10 Article Number: R80 DOI: 10.1186/gb-2004-5-10-r80 Published: 2004

Times Cited in Web of Science Core Collection: 6924

Total Times Cited: 6995

 

 

Record 16 of 25

Title: Pseudo-second order model for sorption processes

Author(s): Ho, YS (Ho, YS); McKay, G (McKay, G)

Source: PROCESS BIOCHEMISTRY Volume: 34 Issue: 5 Pages: 451-465 DOI: 10.1016/S0032-9592(98)00112-5 Published: JUL 1999

Times Cited in Web of Science Core Collection: 6817

Total Times Cited: 7196

 

 

Record 17 of 25

Title: Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Author(s): Schloss, PD (Schloss, Patrick D.); Westcott, SL (Westcott, Sarah L.); Ryabin, T (Ryabin, Thomas); Hall, JR (Hall, Justine R.); Hartmann, M (Hartmann, Martin); Hollister, EB (Hollister, Emily B.); Lesniewski, RA (Lesniewski, Ryan A.); Oakley, BB (Oakley, Brian B.); Parks, DH (Parks, Donovan H.); Robinson, CJ (Robinson, Courtney J.); Sahl, JW (Sahl, Jason W.); Stres, B (Stres, Blaz); Thallinger, GG (Thallinger, Gerhard G.); Van Horn, DJ (Van Horn, David J.); Weber, CF (Weber, Carolyn F.)

Source: APPLIED AND ENVIRONMENTAL MICROBIOLOGY Volume: 75 Issue: 23 Pages: 7537-7541 DOI: 10.1128/AEM.01541-09 Published: DEC 1 2009

Times Cited in Web of Science Core Collection: 6761

Total Times Cited: 6955

 

 

Record 18 of 25

Title: Minimal criteria for defining multipotent mesenchymal stromal cells. The International Society for Cellular Therapy position statement

Author(s): Dominici, M (Dominici, M.); Le Blanc, K (Le Blanc, K.); Mueller, I (Mueller, I.); Slaper-Cortenbach, I (Slaper-Cortenbach, I.); Marini, FC (Marini, F. C.); Krause, DS (Krause, D. S.); Deans, RJ (Deans, R. J.); Keating, A (Keating, A.); Prockop, DJ (Prockop, D. J.); Horwitz, EM (Horwitz, E. M.)

Source: CYTOTHERAPY Volume: 8 Issue: 4 Pages: 315-317 DOI: 10.1080/14653240600855905 Published: AUG 2006

Times Cited in Web of Science Core Collection: 6351

Total Times Cited: 6867

 

 

Record 19 of 25

Title: edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Author(s): Robinson, MD (Robinson, Mark D.); McCarthy, DJ (McCarthy, Davis J.); Smyth, GK (Smyth, Gordon K.)

Source: BIOINFORMATICS Volume: 26 Issue: 1 Pages: 139-140 DOI: 10.1093/bioinformatics/btp616 Published: JAN 1 2010

Times Cited in Web of Science Core Collection: 5777

Total Times Cited: 5843

 

 

Record 20 of 25

Title: Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

Author(s): Wang, Q (Wang, Qiong); Garrity, GM (Garrity, George M.); Tiedje, JM (Tiedje, James M.); Cole, JR (Cole, James R.)

Source: APPLIED AND ENVIRONMENTAL MICROBIOLOGY Volume: 73 Issue: 16 Pages: 5261-5267 DOI: 10.1128/AEM.00062-07 Published: AUG 2007

Times Cited in Web of Science Core Collection: 5573

Total Times Cited: 5720

 

 

Record 21 of 25

Title: The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Author(s): McKenna, A (McKenna, Aaron); Hanna, M (Hanna, Matthew); Banks, E (Banks, Eric); Sivachenko, A (Sivachenko, Andrey); Cibulskis, K (Cibulskis, Kristian); Kernytsky, A (Kernytsky, Andrew); Garimella, K (Garimella, Kiran); Altshuler, D (Altshuler, David); Gabriel, S (Gabriel, Stacey); Daly, M (Daly, Mark); DePristo, MA (DePristo, Mark A.)

Source: GENOME RESEARCH Volume: 20 Issue: 9 Pages: 1297-1303 DOI: 10.1101/gr.107524.110 Published: SEP 2010

Times Cited in Web of Science Core Collection: 5513

Total Times Cited: 5585

 

 

Record 22 of 25

Title: TopHat: discovering splice junctions with RNA-Seq

Author(s): Trapnell, C (Trapnell, Cole); Pachter, L (Pachter, Lior); Salzberg, SL (Salzberg, Steven L.)

Source: BIOINFORMATICS Volume: 25 Issue: 9 Pages: 1105-1111 DOI: 10.1093/bioinformatics/btp120 Published: MAY 1 2009

Times Cited in Web of Science Core Collection: 5354

Total Times Cited: 5431

 

 

Record 23 of 25

Title: Search and clustering orders of magnitude faster than BLAST

Author(s): Edgar, RC (Edgar, Robert C.)

Source: BIOINFORMATICS Volume: 26 Issue: 19 Pages: 2460-2461 DOI: 10.1093/bioinformatics/btq461 Published: OCT 2010

Times Cited in Web of Science Core Collection: 5257

Total Times Cited: 5356

 

 

Record 24 of 25

Title: A BROAD HOST RANGE MOBILIZATION SYSTEM FOR INVIVO GENETIC-ENGINEERING - TRANSPOSON MUTAGENESIS IN GRAM-NEGATIVE BACTERIA

Author(s): SIMON, R (SIMON, R); PRIEFER, U (PRIEFER, U); PUHLER, A (PUHLER, A)

Source: BIO-TECHNOLOGY Volume: 1 Issue: 9 Pages: 784-791 DOI: 10.1038/nbt1183-784 Published: 1983

Times Cited in Web of Science Core Collection: 5235

Total Times Cited: 5305

 

 

Record 25 of 25

Title: Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Author(s): Trapnell, C (Trapnell, Cole); Williams, BA (Williams, Brian A.); Pertea, G (Pertea, Geo); Mortazavi, A (Mortazavi, Ali); Kwan, G (Kwan, Gordon); van Baren, MJ (van Baren, Marijke J.); Salzberg, SL (Salzberg, Steven L.); Wold, BJ (Wold, Barbara J.); Pachter, L (Pachter, Lior)

Source: NATURE BIOTECHNOLOGY Volume: 28 Issue: 5 Pages: 511-U174 DOI: 10.1038/nbt.1621 Published: MAY 2010

Times Cited in Web of Science Core Collection: 5022

Total Times Cited: 5127